| Author Names |
Topic |
Journal Name |
Volume Number |
Issue Number |
Page Number |
Year Published |
Impact Factor |
| Prakash Saudagar and Vikash Kumar Dubey | Carbon Nanotube Based Betulin Formulation shows better efficacy against Leishmania parasite . | Parasitology International | 63 | | 772-776 | 2014 | |
| Prakash Saudagar, Shyam Lal Mudavath, Pipas Saha, Anil K. Saikia, Shyam Sundar and Vikash Kumar Dubey | In vivo assessment of antileishmanial property of 4-(4,4,8-Trimethyl-7-oxo-3-oxabicyclo[3.3.1]non-2-yl)-benzoic acid methyl ester, an oxabicyclo[3.3.1]nonanones. | Letters in Drug Design and Discovery | 11 | | 937-939 | 2014 | |
| Vidhyadhar N, Sushant Singh, Abhay N Singh, Vikash Kumar Dubey | Procerain B, a cysteine protease from Calotropis Procera, requires N-terminus pro-region for activity: cDNA cloning and expression with pro-sequence. | Protein Expression and Purification | 103C | | 16-22 | 2014 | |
| Saravanan Parameswaran, Prakash Saudagar, Vikash Kumar Dubey, Sanjukta Patra. | Discovery of novel anti-leishmanial agents targeting LdLip3 lipase. | Journal of Molecular Graphics and Modelling | 49 | | 68–79 | 2014 | |
| Saravanan Parameswaran, Vikash Kumar Dubey, Sanjukta Patra. | Emulating structural stability of Pseudomonas mendocina lipase: in silico mutagenesis and moleular dynamics studies. | Journal of Molecular Modeling | 20 | | 2501 | 2014 | |
| Mousumi Das, Saudagar Prakash, Shyam Sundar and Vikash Kumar Dubey | Miltefosine unresponsive Leishmania donovani has better ability of resist reactive oxygen species. | FEBS Journal | 280 | | 4807–4815 | 2013 | |
| Saudagar Prakash, Pipas Saha , Anil K. Saikia and Vikash Kumar Dubey | Molecular mechanism underlying antileishmanial effect of oxabicyclo[3.3.1]nonanones: Inhibition of key redox enzymes of the pathogen. | European Journal of Pharmaceutics and Biopharmaceutics | 85 | | 569-577 | 2013 | |
| Sudipta Hazra, Subhalakshmi Ghosh, Madhushree Das Sarma, Mousumi Das, Saudagar Prakash, Vikash Kumar Dubey, Shyam Sundar, Banasri Hazra | Evaluation of a diospyrin derivative as antileishmanial agent and potential modulator of ornithine decarboxylase of Leishmania donovani. | Experimental Parasitology | 135 | | 407-413 | 2013 | |
| Nandini Sarkar and Vikash Kumar Dubey | Exploring critical determinants of protein amyloidogenesis: A review | Journal of Peptide Science | 19 | | 529-536 | 2013 | |
| Sushant Singh, Abhay Narayan Singh, Anil Verma and Vikash Kumar Dubey | Biodegradable Polycaprolactone (PCL) Nanosphere Encapsulating Superoxide Dismutase and Catalase Enzymes. | Applied Biochemistry and Biotechnology | 171 | | 1545-1558 | 2013 | |
| Sushant Singh, Abhay Narayan Singh, Anil Verma and Vikash Kumar Dubey | A novel superoxide dismutase from Cicer arietinum L. seedlings: purification and characterization. | Protein and Peptide Letters | 20 | | 741-748 | 2013 | |
| Sonali Seth, Debamitra Chakrovorty, Vikash Kumar Dubey and Sanjukta Patra | An insight into plant lipase research – challenges encountered. Protein Expression and Purification | Protein Expression and Purification | 95C | | 13-21 | 2013 | |
| N. K. Prasanna Kumari, Vikash Kumar Dubey and Medicherla V. Jagannadham | SDS Induced Refolding of Pre-molten Globule State of Cryptolepain: Differences in Chemical and Temperature-Induced Equilibrium Unfolding of the Protein in SDS-Induced State. | Biological Sciences | 83 | | 71-80 | 2013 | |
| Rajiv K. Verma, Vijay K. Prajapati, Girijesh K. Verma, Deblina Chakraborty, Shyam Sundar, Madhukar Rai, Vikash Kumar Dubey* and Maya Shankar Singh. | Molecular Docking and in vitro Antileishmanial Evaluation of Chromene-2-thione Analogues. | ACS Medicinal Chemistry Letters | 3 | | 243-247 | 2012 | |
| Anil K Shukla, Sanjukta Patra and Vikash Kumar Dubey | PEGylated nanospheres encapsulating antileishmanial drugs for their specific macrophage targeting, reduced toxicity and deliberate intracellular release. | Vector-Borne and Zoonotic Diseases | 12 | | 953-960 | 2012 | |
| Anil K Shukla, Sanjukta Patra and Vikash Kumar Dubey | Nyctanthes arbortristis results in increased Reactive Oxygen Species and cellular redox homeostasis imbalance in Leishmania parasite. | European Journal of Medicinal Chemistry | 54 | | 49-58 | 2012 | |
| Neha Sharma, Anil Kumar Shukla, Mousumi Das and Vikash Kumar Dubey | Evaluation of plumbagin and its derivative as potential modulator of redox thiol metabolism of Leishmania parasite. | Parasitology Research | 110 | | 341-348 | 2012 | |
| Abhinav Grover, Shashank Prakash Katiyar, Jeyaraman Jeyakanthan, Vikash Kumar Dubey and Durai Sundar. | Blocking protein kinase C signaling pathway: mechanistic insights into the anti-leishmanial activity of prospective herbal drugs from Withania somnifera. | BMC Genomics | 13 | 7 | | | |
| Ruchika Bhardwaj, Prakash Saudagar and Vikash Kumar Dubey | Nanobiosciences: A contemporary line for Antiparasitic Drug. | Molecular and Cellular Pharmacology | 4 | | 97-103 | 2012 | |
| Deblina Chakraborty, Parameswaran Saravanan, Sanjukta Patra and Vikash Kumar Dubey | Studies on ornithine decarboxylase of Leishmania donovani: Structure modeling and inhibitor docking. | Medicinal Chemistry Research | 167 | | 439-461 | 2012 | |
| Parameswaran Saravanan, Vikash Kumar Dubey and Sanjukta Patra | Targeting essential cell wall lipase Rv3802c for potential therapeutics against tuberculosis. | Journal of Molecular Graphics and Modelling | 38 | | 235-242 | 2012 | |
| Manjeet Kumar, Nandini Sarkar, and Vikash Kumar Dubey | Evaluating quinacrine as a potential amyloid imaging compound: studies on hen egg white lysozyme as model system. | Protein and Peptide Lett. | 19 | | 826-831 | 2012 | |
| Abhinav Grover, Sushil Kumar Shakyawar, Saudagar Prakash, Vikash Kumar Dubey and Durai Sundar | Epitopic analysis of potential vaccine candidate in Leishmania infantum for development of human vaccine. | Letters in Drug Design and Discovery | 9 | | 698-705 | 2012 | |
| Abhinav Grover, Shashank Prakash Katiyar, Jeyaraman Jeyakanthan, Vikash Kumar Dubey and Durai Sundar. | Mechanistic insights into the dual inhibition strategy for checking leishmaniasis. | Journal of Biomolecular Structure & Dynamics | 30 | | 474-487 | 2012 | |
| Sushant Singh, Anil Verma and Vikash Kumar Dubey | Aluminium induced oxidative stress in germinating chickpea ( Cicer arietinum L.) seeds. | Brazilian Journal of Plant Physiology | 24 | | 47-54 | 2012 | |
| Parameswaran Saravanan, Vikash Kumar Dubey, Sanjukta Patra. | Potential Selective Inhibitors against Rv0183 of Mycobacterium tuberculosis Targeting Host Lipid Metabolism. | Chemical Biology & Drug Design | 79 | | 1056-1062 | 2012 | |
| Debamitra Chakravorty, Parameswaran Saravanan, Vikash Kumar Dubey, Sanjukta Patra. | Unraveling the rationale behind organic solvent stability of lipases. | Applied Biochemistry and Biotechnology | 167 | | 439-461 | 2012 | |
| Abhinav Grover, Shashank Prakash Katiyar, Sanjeev Kumar Singh, Vikash Kumar Dubey and Durai Sundar | A Leishmaniasis study: structure-based screening and molecular dynamics mechanistic analysis for discovering potent inhibitors of spermidine synthase. | Biochimica et Biophysica Acta - BBA: Proteins and Proteomics | 1824 | | 1476-1483 | 2012 | |
| Saudagar Prakash and Vikash Kumar Dubey | Cloning, expression, characterization, and inhibition studies on trypanothione synthetase, a drug target enzyme, from Leishmania donovani. | Biological Chemistry | 392 | | 1113-1122 | 2011 | |
| Nandini Sarkar; Manjeet Kumar; Vikash Kumar Dubey | Rottlerin dissolves pre-formed protein amyloid: A study on hen egg white lysozyme. | Biochimica et Biophysica Acta-General Subjects | 1810 | | 809-814 | 2011 | |
| Abhay Narayan Singh, Neeraj Suthar, Sushant Singh, and Vikash Kumar Dubey | Glutaraldehyde activated chitosan matrix for immobilization of a novel cysteine protease, procerain B. | Journal of Agricultural and Food Chemistry | 59 | | 6256-5262 | 2011 | |
| Nandini Sarkar, Manjeet Kumar and Vikash Kumar Dubey | Effect of sodium tetrathionate on amyloid fibril: Insight in to the role of disulfide bond in amyloid progression | Biochimie | 93 | | 962-968 | 2011 | |
| Nandini Sarkar, Manjeet Kumar and Vikash Kumar Dubey | Exploring possibility of promiscuity of amyloid inhibitor: Studies on effect of selected compounds on folding and amyloid formation of proteins. | Process Biochemistry | 46 | | 1179-1185 | 2011 | |
| Anil K Shukla, Sanjukta Patra and Vikash Kumar Dubey | Evaluation of selected antitumor agents as subversive substrate and potential inhibitor of trypanothione reductase: An alternative approach for chemotherapy of Leishmaniasis | Molecular and Cellular Biochemistry | 352 | | 261-270 | 2011 | |
| Anil K Shukla, Sanjukta Patra and Vikash Kumar Dubey | Deciphering molecular mechanism underlying antileishmanial activity of Nyctanthes arbortristis, an Indian medicinal plant. | Journal of Ethnopharmacology | 134 | | 996-998 | 2011 | |
| Jihun Lee, Sachiko I. Blaber, Vikash K. Dubey and Michael Blaber | A polypeptide "building block" for the -trefoil fold identified by "top-down symmetric deconstruction. | Journal of Molecular Biology | 407 | | 744-763 | 2011 | |
| Bankapallai Leela Krishna, Abhay Narain Singh, Sanjukta Patra* and Vikash Kumar Dubey | Purification, characterization and immobilization of urease from Momordica charantia seeds | Process Biochemistry | 46 | | 1486-1491 | 2011 | |
| Abhay Narain Singh and Vikash Kumar Dubey | Exploring applications of procerain B, a novel protease from Calotropis procera, and characterization by N-terminal sequencing as well as peptide mass fingerprinting. | Applied Biochemistry and Biotechnology | 164 | | 573-580 | 2011 | |
| Anil K Shukla, Sanjukta Patra; Vikash Kumar Dubey | Biophysical and folding parameters of trypanothione reductase from Leishmania infantum | Applied Biochemistry and Biotechnology | 165 | | 13-23 | 2011 | |
| Santhosh K. Venkatesan, Prakash Saudagar and Vikash Kumar Dubey | Identification of novel inhibitor of Trypanothione synthtase from two Leishmania species: comparative in silico analysis. | Journal of Proteins and Proteomics | 2 | | 41-48 | 2011 | |
| Neeraj Suthar and Vikash Kumar Dubey | In silico approach to counter Leishmania donovani by targeting cysteine protease B : Structure modeling and inhibitor docking. | Global Journal of Biochemistry | 2 | | 49-58 | 2011 | |
| Santhosh K. Venkatesan, Prakash Saudagar, Anil Kumar Shukla and Vikash Kumar Dubey | Screening natural products database for identification of potential antileishmanial chemotherapeutic agents. | Interdisciplinary Sciences: Computational Life Sciences | 3 | | 1-15 | 2011 | |
| Parameswaran Saravanan, Santhosh K. Venkatesan, C Gopi Mohan, Sanjukta Patra* and Vikash Kumar Dubey | Mitogen-activated protein kinase 4 of Leishmania parasite as a therapeutic target. | European Journal of Medicinal Chemistry | 45 | | 5662-5670 | 2010 | |
| Debamitra Chakravorty, Parameswaran Saravanan, Vikash Kumar Dubey and Sanjukta Patra. | In Silico Characterization of Thermostable Lipases. | Extremophiles | 15 | | 89-103 | 2011 | |
| Sushil Kumar Shakyawar, Arun Goyal, Vikash Kumar Dubey | Genome analysis of selected foodborne pathogens for identification of drug targets. | Current Trends in Biotechnology and Pharmacy | 5 | | 1134-1148 | 2011 | |
| Sushil Kumar Shakyawar, Arun Goyal, Vikash Kumar Dubey | Database of in silico Predicted Potential Drug Target Proteins in Common Bacterial Human Pathogens. | American Journal of Drug Discovery and Development | 1 | | 70-74 | 2011 | |
| Praveen Kumar#, Sushant Singh# and Vikash Kumar Dubey | Effect of Arsenic stress on Vigna radiate: A Biochemical studies. | International Journal of Environmental Science and Engineering Research | 1 | | 1-14 | 2010 | |
| Parameswaran Saravanan, Vikash Kumar Dubey and Sanjukta Patra | In silico characterization of thermoactive, alkaline and detergent-stable lipase from a Staphylococcus aureus strain. | In Silico Biology | 10 | | 265–276 | 2010 | |
| Santhosh Kannan, Anil Kumar Shukla and Vikash Kumar Dubey | Molecular docking studies of selected tricyclic and quinone derivatives on trypanothione reductase of Leishmania infantum. | Journal of Computational Chemistry | 31 | | 2463-2472 | 2010 | |
| Alka Dwevedi, Vikash Kumar Dubey, Medicherla V. Jagannadham, Arvind M. Kayastha | Insights into pH-Induced Conformational transition of b-Galactosidase from Pisum sativum leading to its Multimerization. | Applied Biochemistry and Biotechnology | 162 | | 2294-2312 | 2010 | |
| Abhay Narain Singh, Anil Kumar Shukla, M.V. Jagannadham and Vikash Kumar Dubey | Purification of a novel cysteine protease, procerain B, from Calotropis procera with distinct characteristics compared to procerain. | Process Biochemistry | 45 | | 399-406 | 2010 | |
| Nandini Sarkar and Vikash Kumar Dubey | Protein nano-fibrilar structure and associated diseases. | Current Proteomics | 7 | | 116-120 | 2010 | |
| Anil K Shukla, Bishal K Singh, Sanjukta Patra, Vikash Kumar Dubey | Rational approaches for drug designing against leishmaniasis. | Applied Biochemistry and Biotechnology | 160 | | 2208-2218 | 2010 | |
| Nandini Sarkar, Abhay Narain Singh and Vikash Kumar Dubey | Effect of curcumin on amyloidogenic property of molten globule like intermediate state of 2,5-Diketo-D-Gluconate Reductase A. | Biological Chemistry | 390 | | 1057-1061 | 2009 | |
| Neeraj Suthar, Arun Goyal and Vikash Kumar Dubey | Identification of potential drug targets of Leishmania Infantum by in-silico genome analysis. | Letters in Drug Design and Discovery | 6 | | 620-622 | 2009 | |
| Bishal Kumar Singh and Vikash Kumar Dubey | In silico studies on tryparedoxin peroxidase of Leishmania infantum: Structural aspects. | Current Pharmaceutical Biotechnology | 10 | | 626-630 | 2009 | |
| Syed Baquer Rizvi , Anil Kumar Shukla and Vikash Kumar Dubey | A Simple method based on multiple alignment and phylogeny to derive a correlation between the protein fold and sequence via motif search. | Interdisciplinary Sciences: Computational Life Sciences | 1 | | 235-243 | 2009 | |
| Nandini Sarkar Pramod Kumar Srivastava and Vikash Kumar Dubey | Understanding the Language of Vitamin C. | Current Nutrition & Food Science | 5 | | 53-55 | 2009 | |
| Vikash Kumar Dubey | Structural Genomics on Membrane Proteins. | Applied Biochemistry and Biotechnology | 157 | | 111 | 2009 | |
| Anil Kumar Shukla, Utapl Bora and Vikash K. Dubey | Functional Adaptations in Fibroblast Growth Factor (FGFs) Family. | Journal of Proteins and Proteomics | 1 | | 11-13 | 2009 | |
| Naresh Kasoju , Shahin Sharif Ali, Vikash Kumar Dubey and Utpal Bora | Exploiting the potential of Collagen as a Natural Biomaterial in Drug Delivery. | Journal of Proteins and Proteomics | 1 | | 31-36 | 2009 | |
| Ritu Tomar, Vikash Kumar Dubey,* and M.V. Jagannadham | Biophysical characterization and folding studies of plant protease, Wrightin: identification folding intermediate under different conditions. | The Protein Journal | 28 | | 213-223 | 2009 | |
| Monu Pande, N K Prasanna Kumari, Vikash Kumar Dubey*, Pinky Tripathi, and M.V. Jagannadham | Stability and Unfolding Studies on Alkaline Denatured State (Ip) of Pepsin. | Process Biochemistry | 44 | | 906-911 | 2009 | |
| Ritu Tomar, Vikash Kumar Dubey, and M.V. Jagannadham | Effect of Alkyl Alcohols on partially unfolded state of Proteinase K: differential stability of alpha-helix and beta-sheet rich regions of the enzyme. | Biochimie | 91 | | 951-960 | 2009 | |
| Bishal K. Singh, Nandini Sarkar, M.V. Jagannadham and Vikash K. Dubey | Modeled Structure of Trypanothione Reductase of Leismania infantum. | J Biochem Mol Biol. | 41 | | 444-447 | 2008 | |
| Vikash K Dubey* and M.V Jagannadham | Roles for cavities in protein structure: New insights. | Current Proteomics | 5 | | 157-160 | 2008 | |
| Bishal K. Singh, Nandini Sarkar and Vikash K. Dubey | Modeled Structure of Trypanothione synthetase of Leishmania infantum for development of novel therapeutics for leishmaniasis. | Current Trends in Biotechnology and Pharmacy | 2 | | 390-395 | 2008 | |
| Jihun Lee, Vikash K Dubey, Liam M Longo, Michael Blaber | Logical OR Redundancy within the Asx-Pro-Asx-Gly Type I b-turn Motif. | Journal of Molecular Biology | 377 | | 1251-1264 | 2008 | |
| Vikash K. Dubey*, Bishal K Singh, Nandini Sarkar, Monu Pande and M.V Jagannadham. | Biophysical characterization of Fibroblast Growth Factor homologous Factor-1b (FHF-1b): Sodium dodecyl sulfate promotes two state folding. | Protein and Peptide Lett. | 15 | | 215-218 | 2008 | |
| Vikash K. Dubey*, Monu Pande, Bishal Kumar Singh and Medicherla V. Jagannadham | Realm of Papain-Like Proteases: Applications of their Inhibitors. | African Journal of Biotechnology | 6 | | 1077-1086 | 2007 | |
| Vikash Kumar Dubey, Jihun Lee, Thayumana Somasundaram, Sachiko Blaber and Michael Blaber. | Spackling the crack: stabilizing human fibroblast growth factor-1 by targeting the N- and C-termini b-strand interactions. | Journal of Molecular Biology | 371 | | 256-268 | 2007 | |
| Sreedevi Nallamsetty, Vikash K. Dubey, Monu Pande, P. K. Ambasht and M.V. Jagannadham | Accumulation of partly folded states in the equilibrium unfolding of ervatamin A: Spectroscopic description of the native, intermediate, and unfolded states. | Biochimie | 89 | | 1416-24 | 2007 | |
| Monu Pande, Vikash Kumar Dubey, Vishal Sahu and M.V. Jagannadham | Conformational Plasticity of Cryptolepain: Accumulation of Partially Unfolded States in Denaturants induced Equilibrium Unfolding. | Journal of Biotechnology | 131 | | 404-414 | 2007 | |
| Monu Pande, Vikash K. Dubey, and Medicherla V. Jagannadham | Crystallization and preliminary x-ray analysis of cryptolepain: A novel glycosylated serine protease from Cryptolepis buchanani. | Acta Crystallographica | F63 | | 74-77 | 2007 | |
| Jihun Lee, Vikash Kumar Dubey, Thayumanasamy Somasundaram and Michael Blaber | Conversion of type I 4:6 to 3:5 ?-turn types in human acidic fibroblast growth factor: Effects upon structure, stability, folding, and mitogenic function. | Proteins: Structure Function Bioinformatics | 62 | | 686-697 | 2006 | |
| Monu Pande, Vikash K. Dubey, Subhash Chandra Yadav and Medicherla V. Jagannadham | A Novel Serine Protease Cryptolepain, from Cryptolepis buchanani: Purification and Biochemical Characterization. | Journal of Agricultural and Food Chemistry (ACS) | 27 | | 10141-10150 | 2006 | |
| Vikash Kumar Dubey, Monu Pande and M.V. Jagannadham | Snapshots of Protein Folding Problem: Implications of Folding and Misfolding Studies. | Protein and Peptide Lett. | 13 | | 883- 888 | 2006 | |
| Vikash K. Dubey, Ashu Saha, M.V. Jagannadham and A.M. Kayastha | Effect of Organic solvent on molten globule state of procerain: b-sheet to l-helix switchover in presence of TFE. | Protein and Peptide Lett. | 13 | | 545-547 | 2006 | |
| Vikash K. Dubey, Jihun Lee, and Michael Blaber | Redesigning Symmetry-Related "Mini-Core" Regions of FGF-1 to Increase Primary Structure Symmetry: Thermodynamic and Functional Consequences of Structural Symmetry. | Protein Science | 14 | | 2315-2323 | 2005 | |
| Carlo Travaglini-Allocatelli, Stefano Gianni, Vikash K. Dubey, Alessandro Borgia, Adele Di Matteo, Daniele Bonivento, Francesca Cutruzzola, Kara L. Bren, Maurizio Brunori. | An obligatory intermediate in the folding pathway of cyctochrome C552 from Hydrogenobacter thermophilus. | J. Biol Chem. | 280 | | 25729-25734 | 2005 | |
| Stephen R. Brych, Vikash K. Dubey, Ewa Bienkiewicz, Jihun Lee, Timothy M. Logan and Michael Blaber | Symmetric primary and tertiary structure mutations within a symmetric superfold: A solution and not a constraint to achieving a foldable polypeptide? | Journal of Molecular Biology | 344 | | 769-780 | 2004 | |
| Monica Sundd, Suman Kundu, Vikash Kumar Dubey and M.V. Jagannadham | Unfolding of ervatamin C in the presence of organic solvents: Sequential unfolding of the protein in O-state. | Journal of Biochemistry and Molecular Biology | 37 | | 586-596 | 2004 | |
| Vikash Kumar Dubey and M.V. Jagannadham | Differences in the unfolding of procerain induced by pH, GuHCl, urea and temperature. | Biochemistry (ACS) | 42 | | 12287-12297 | 2003 | |
| Vikash Kumar Dubey and M.V. Jagannadham | Procerain, a stable cysteine protease from Calotropis procera | Phytochemistry | 62 | | 1057-1071 | 2003 | |